Two-year-old Jalanie Fortson, who is described as a black female, was last seen wearing a hot pink zip up sweater, matching sweatpants and black and grey shoes. Her hair was described as being in two long braids.
Police are looking for a silver 2008 Ford Fusion with the license plate 7RLR145.
The suspects named in the case are Javonn Fortson and Lipine Faafui. A third female suspect is also being sought.
The suspects should be considered armed and dangerous.
San Francisco police said the girl was found safely shortly before 10 p.m. Further details of her being found were not immediately released.
The Amber Alert was issued for the following counties: San Francisco, Alameda, Marin, San Mateo, Solano, Contra Costa, yolo, Sutter, Amador, San Joaquin, and Sacramento.